Services
NGS • Population Genetics • Reproducible Pipelines
I provide professional bioinformatics services focused on NGS data processing, population genetics analyses, and reproducible workflows.
My work is oriented toward clarity, statistical rigor, and publication-ready outputs, supporting researchers and teams at different stages of their projects.
Core Services
1. NGS Data Processing & Alignment
End-to-end processing of raw sequencing data, from FASTQ files to analysis-ready outputs.
Typical tasks include:
Read quality control and trimming
Reference-based read alignment
Generation of sorted and indexed BAM files
Basic alignment statistics and QC reports
2. Population Genetics Analyses (VCF-based)
Statistical analysis of genetic variation using variant data in VCF format.
This service focuses on quantitative population genetics, including:
Principal Component Analysis (PCA)
Genetic diversity and heterozygosity
Inbreeding coefficients (F_IS)
Pairwise population differentiation (F_ST)
Nucleotide diversity (π)
Optional extensions include sliding-window analyses and ancestry inference.
➡️ [Learn more: Population Genetics Analysis from VCF]
(available soon)
3. Custom Pipelines & Reproducible Workflows
Design and execution of custom bioinformatics pipelines tailored to specific datasets or research questions.
Includes:
Workflow design (bash-based or workflow managers)
Optimization and reproducibility
Clean, documented outputs suitable for reuse
This service is appropriate for projects that do not fit a predefined template.
4. Technical Consulting & Analytical Support
High-level support for projects that require methodological clarity rather than raw computation.
Typical use cases:
Interpreting QC metrics and analytical results
Choosing appropriate population genetic statistics
Reviewing figures, methods, and analytical decisions
Supporting theses, manuscripts, or reports under time constraints
Who this is for
Research labs without dedicated bioinformatics staff
MSc and PhD students needing structured analytical support
Teams preparing manuscripts or responding to reviewers
Biotech or agrogenomics groups working with NGS data
Anyone needing clear, reliable, and defensible analyses
Research labs without dedicated bioinformatics staff
MSc and PhD students needing structured analytical support
Teams preparing manuscripts or responding to reviewers
Biotech or agrogenomics groups working with NGS data
Anyone needing clear, reliable, and defensible analyses
How it works
You describe your data or project
We define the analytical scope and deliverables
I run the analysis and deliver structured results
Optional follow-up for clarification or integration into manuscripts
You describe your data or project
We define the analytical scope and deliverables
I run the analysis and deliver structured results
Optional follow-up for clarification or integration into manuscripts
Contact
📧 bio.lmgoncalves@gmail.com
⏱️ Typical response time: within 24 hours